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Phosphorylation of the Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
ROESY
90% WATER 10% D2O
0
6.0
1.0 atm
285.0
2
NOESY
90% WATER 10% D2O
0
6.0
1.0 atm
285.0
3
TOCSY
90% WATER 10% D2O
4
IP-COSY
90% WATER 10% D2O
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
OTHER
800
2
Bruker
OTHER
600
NMR Refinement
Method
Details
Software
DYANA AMBER 8.0.
INITIAL NMR STRUCTURES WERE CALCULATED BY DYANA, WHICH INCLUDES MODIFIED SEP RESIDUE, PHOSPHORYLATED SER, CRAFT AND LEGGE, 2005, J.BIOL MOL.NMR. TOP10 ANNEALLED STRUCTURES THEN FURTHER MINIMIZED VIA AMBER 8.0.
DYANA AMBER
NMR Ensemble Information
Conformer Selection Criteria
LOWEST POTENTIAL ENERGY ENSEMBLES
Conformers Calculated Total Number
50
Conformers Submitted Total Number
10
Additional NMR Experimental Information
Details
THE UNPHOSPHORYLATED TFCD PEPTIDE NMR STRUCTURES WERE CALCULATED USING 2D HOMONUCLEAR NMR SPECTROSCOPY METHODS.