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FE-SOAKED CRYSTAL STRUCTURE OF THE DPS92 FROM DEINOCOCCUS RADIODURANS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 0.01M MGCL2, 0.05M TRIS PH7.5, 5% ISOPROPANOL, pH 7.50
Crystal Properties Matthews coefficient Solvent content 2.52 54.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.965 α = 90 b = 88.965 β = 90 c = 88.965 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2005-07-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 1.1070,1.7399 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 29.66 99.9 0.09 16.9 7.3 13986 1.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 100 0.85 1.7 7.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 89.09 13986 99.9 0.188 0.188 0.1849 37.46
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.141 r_dihedral_angle_4_deg 29.035 r_dihedral_angle_3_deg 16.89 r_dihedral_angle_1_deg 5.537 r_scangle_it 3.89 r_scbond_it 2.503 r_mcangle_it 1.721 r_angle_refined_deg 1.422 r_mcbond_it 1.073 r_nbtor_refined 0.299
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.141 r_dihedral_angle_4_deg 29.035 r_dihedral_angle_3_deg 16.89 r_dihedral_angle_1_deg 5.537 r_scangle_it 3.89 r_scbond_it 2.503 r_mcangle_it 1.721 r_angle_refined_deg 1.422 r_mcbond_it 1.073 r_nbtor_refined 0.299 r_nbd_refined 0.21 r_symmetry_hbond_refined 0.2 r_symmetry_vdw_refined 0.161 r_xyhbond_nbd_refined 0.146 r_chiral_restr 0.111 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1318 Nucleic Acid Atoms Solvent Atoms 135 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling