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14-3-3 Protein Eta (Human) Complexed to Peptide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BQ0 PDB ENTRY 2BQ0
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 0.2M MGCL2, 0.1M HEPES PH 7.5, 25% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.5 51.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.251 α = 90 b = 79.398 β = 95.15 c = 125.109 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2005-10-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 66.96 99.9 0.08 12 3.8 61914
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.27 100 0.5 2.5 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2BQ0 2.15 125 60014 1883 99.9 0.185 0.184 0.1925 0.248 0.2502 RANDOM 38.86
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.35 0.37 1.28 -1.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.899 r_dihedral_angle_4_deg 23.341 r_dihedral_angle_3_deg 15.63 r_scangle_it 10.103 r_scbond_it 7.81 r_dihedral_angle_1_deg 5.61 r_mcangle_it 4.297 r_mcbond_it 3.274 r_angle_refined_deg 1.467 r_angle_other_deg 0.903
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.899 r_dihedral_angle_4_deg 23.341 r_dihedral_angle_3_deg 15.63 r_scangle_it 10.103 r_scbond_it 7.81 r_dihedral_angle_1_deg 5.61 r_mcangle_it 4.297 r_mcbond_it 3.274 r_angle_refined_deg 1.467 r_angle_other_deg 0.903 r_nbd_refined 0.209 r_symmetry_vdw_refined 0.2 r_symmetry_vdw_other 0.198 r_symmetry_hbond_refined 0.187 r_xyhbond_nbd_refined 0.178 r_nbtor_refined 0.176 r_nbd_other 0.171 r_chiral_restr 0.092 r_nbtor_other 0.087 r_bond_refined_d 0.017 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7489 Nucleic Acid Atoms Solvent Atoms 397 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing