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Structure of iodinated CBM25 from Bacillus halodurans amylase
Crystallization Crystal Properties Matthews coefficient Solvent content 1.8 31.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.198 α = 90 b = 41.819 β = 97.18 c = 68.183 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.39 20 88 0.07 17.3 7.8 28505 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.39 67.42 28505 1542 88 0.204 0.201 0.2046 0.25 0.2524 RANDOM 19.97
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.1 0.33 0.68 -0.5
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.439 r_scangle_it 7.195 r_scbond_it 4.365 r_mcangle_it 2.762 r_angle_refined_deg 1.893 r_mcbond_it 1.715 r_angle_other_deg 0.981 r_symmetry_vdw_other 0.313 r_nbd_other 0.268 r_nbd_refined 0.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.439 r_scangle_it 7.195 r_scbond_it 4.365 r_mcangle_it 2.762 r_angle_refined_deg 1.893 r_mcbond_it 1.715 r_angle_other_deg 0.981 r_symmetry_vdw_other 0.313 r_nbd_other 0.268 r_nbd_refined 0.25 r_symmetry_vdw_refined 0.195 r_xyhbond_nbd_refined 0.168 r_chiral_restr 0.124 r_symmetry_hbond_refined 0.122 r_nbtor_other 0.091 r_gen_planes_other 0.021 r_bond_refined_d 0.019 r_gen_planes_refined 0.014 r_bond_other_d 0.003 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1457 Nucleic Acid Atoms Solvent Atoms 212 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement