☰ Navigation Tabs
FAMILY 30 CARBOHYDRATE-BINDING MODULE OF CELLULOSOMAL CELLULASE CEL9D- CEL44B OF CLOSTRIDIUM THERMOCELLUM
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1WMX PDB ENTRY 1WMX
Crystallization Crystal Properties Matthews coefficient Solvent content 3 60
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.579 α = 90 b = 85.475 β = 90 c = 88.926 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.27 50 99.9 0.08 18.6 6.3 24116 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.27 2.39 100 0.32 5.9 6.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1WMX 2.27 20 21633 2440 99.9 0.221 0.216 0.265 RANDOM 33.56
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.45 -0.54 0.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.61 r_dihedral_angle_4_deg 20.156 r_dihedral_angle_3_deg 13.643 r_dihedral_angle_1_deg 6.563 r_scangle_it 1.276 r_angle_refined_deg 1.031 r_mcangle_it 0.847 r_scbond_it 0.775 r_mcbond_it 0.466 r_nbtor_refined 0.299
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.61 r_dihedral_angle_4_deg 20.156 r_dihedral_angle_3_deg 13.643 r_dihedral_angle_1_deg 6.563 r_scangle_it 1.276 r_angle_refined_deg 1.031 r_mcangle_it 0.847 r_scbond_it 0.775 r_mcbond_it 0.466 r_nbtor_refined 0.299 r_symmetry_vdw_refined 0.189 r_nbd_refined 0.172 r_xyhbond_nbd_refined 0.109 r_symmetry_hbond_refined 0.07 r_chiral_restr 0.063 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2779 Nucleic Acid Atoms Solvent Atoms 217 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOLREP phasing