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Rat endophilin A1 BAR domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 277 25% BUTANE-1,4-DIOL, 100MM TRIS PH 8.0,4DEGC, CRYOPROTECTED IN 40% BUTANE-1,4-DIOL, 25% ETHYLENE GLYCOL
Crystal Properties Matthews coefficient Solvent content 8.76 85.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 126.578 α = 90 b = 126.578 β = 90 c = 101.226 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2004-11-05 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 44 99.9 0.16 19.8 22.1 393336 6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.9 3.06 100 0.95 3.6 22.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.9 89.44 16875 904 99.9 0.28 0.279 0.2729 0.295 RANDOM 59.79
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.32 0.32 -0.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.81 r_dihedral_angle_3_deg 17.836 r_dihedral_angle_4_deg 14.325 r_dihedral_angle_1_deg 4.461 r_scangle_it 1.833 r_scbond_it 1.239 r_angle_refined_deg 0.956 r_mcangle_it 0.696 r_mcbond_it 0.595 r_nbtor_refined 0.293
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.81 r_dihedral_angle_3_deg 17.836 r_dihedral_angle_4_deg 14.325 r_dihedral_angle_1_deg 4.461 r_scangle_it 1.833 r_scbond_it 1.239 r_angle_refined_deg 0.956 r_mcangle_it 0.696 r_mcbond_it 0.595 r_nbtor_refined 0.293 r_nbd_refined 0.235 r_symmetry_vdw_refined 0.172 r_xyhbond_nbd_refined 0.128 r_symmetry_hbond_refined 0.08 r_chiral_restr 0.072 r_bond_refined_d 0.02 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1653 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling SHARP phasing