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Structure of aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.7 0.05 M H3CIT/NA3CIT PH=5.7 14% PEG3350, pH 5.70
Crystal Properties Matthews coefficient Solvent content 2.1 42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.78 α = 90 b = 69.948 β = 90 c = 71.239 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS 2005-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 47.5 96.4 0.13 11.8 6.6 21391
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 77.6 0.58 2.27 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 49.94 20262 1092 96.5 0.177 0.173 0.1851 0.242 0.2469 RANDOM 18.97
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.76 -1.44 2.2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.399 r_dihedral_angle_3_deg 14.551 r_dihedral_angle_4_deg 14.237 r_scangle_it 9.302 r_scbond_it 7.692 r_dihedral_angle_1_deg 6.627 r_mcangle_it 4.891 r_mcbond_it 3.794 r_angle_refined_deg 1.282 r_angle_other_deg 0.789
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.399 r_dihedral_angle_3_deg 14.551 r_dihedral_angle_4_deg 14.237 r_scangle_it 9.302 r_scbond_it 7.692 r_dihedral_angle_1_deg 6.627 r_mcangle_it 4.891 r_mcbond_it 3.794 r_angle_refined_deg 1.282 r_angle_other_deg 0.789 r_symmetry_vdw_other 0.209 r_nbd_refined 0.197 r_nbtor_refined 0.186 r_nbd_other 0.183 r_xyhbond_nbd_refined 0.174 r_symmetry_vdw_refined 0.155 r_symmetry_hbond_refined 0.144 r_nbtor_other 0.083 r_chiral_restr 0.075 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2285 Nucleic Acid Atoms Solvent Atoms 189 Heterogen Atoms 9
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling SHELXD phasing