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Structure of N-Terminal FAD Binding motif of mouse MICAL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 PROTEIN SAMPLE: 20 MM HEPES PH 7.0, 1M NACL, 1MM DTT, 4 MG/ML MICAL RECERVOIR: 100MM NA ACETATE PH 4.6, 42% W/V PEG 2K MME 0.3 M (NH4)2SO4
Crystal Properties Matthews coefficient Solvent content 2.2 47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.969 α = 90 b = 87.338 β = 111.68 c = 80.81 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2005-02-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X6A NSLS X6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 98.9 0.11 15.2 3.5 62811
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 94 0.59 1.56 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 2 27.94 59660 3124 100 0.195 0.192 0.266 RANDOM 35.55
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.58 -2 2.33 -2.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.412 r_dihedral_angle_4_deg 20.624 r_dihedral_angle_3_deg 19.778 r_dihedral_angle_1_deg 7.251 r_scangle_it 4.351 r_scbond_it 2.846 r_angle_refined_deg 1.976 r_mcangle_it 1.866 r_mcbond_it 1.189 r_nbtor_refined 0.321
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.412 r_dihedral_angle_4_deg 20.624 r_dihedral_angle_3_deg 19.778 r_dihedral_angle_1_deg 7.251 r_scangle_it 4.351 r_scbond_it 2.846 r_angle_refined_deg 1.976 r_mcangle_it 1.866 r_mcbond_it 1.189 r_nbtor_refined 0.321 r_symmetry_vdw_refined 0.295 r_nbd_refined 0.246 r_symmetry_hbond_refined 0.233 r_xyhbond_nbd_refined 0.186 r_chiral_restr 0.146 r_bond_refined_d 0.02 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7413 Nucleic Acid Atoms Solvent Atoms 617 Heterogen Atoms 107
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing