☰ Navigation Tabs
RNAse after a high dose X-ray "burn"
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 30 % PEG 5000 MME, 1 M SODIUM CHLORIDE,50 MM PH 4.5 SODIUM ACETATE
Crystal Properties Matthews coefficient Solvent content 2.46 49.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.132 α = 90 b = 64.132 β = 90 c = 63.643 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD BENT MIRROR 2004-12-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 50 99.3 0.05 16.15 3.6 24403 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.59 98 0.3 3.67 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.4 45 28376 1511 99.2 0.151 0.149 0.181 0.1939 RANDOM 10.71
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 -0.06 -0.11 0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.435 r_dihedral_angle_4_deg 22.543 r_dihedral_angle_3_deg 11.032 r_dihedral_angle_1_deg 6.324 r_scangle_it 5.24 r_scbond_it 4.086 r_mcangle_it 3.04 r_mcbond_it 2.434 r_angle_refined_deg 1.681 r_angle_other_deg 1.015
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.435 r_dihedral_angle_4_deg 22.543 r_dihedral_angle_3_deg 11.032 r_dihedral_angle_1_deg 6.324 r_scangle_it 5.24 r_scbond_it 4.086 r_mcangle_it 3.04 r_mcbond_it 2.434 r_angle_refined_deg 1.681 r_angle_other_deg 1.015 r_symmetry_hbond_refined 0.519 r_nbd_refined 0.321 r_symmetry_vdw_other 0.28 r_symmetry_vdw_refined 0.255 r_xyhbond_nbd_refined 0.246 r_nbd_other 0.232 r_nbtor_refined 0.186 r_chiral_restr 0.121 r_nbtor_other 0.089 r_bond_refined_d 0.019 r_gen_planes_refined 0.009 r_bond_other_d 0.007 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 951 Nucleic Acid Atoms Solvent Atoms 143 Heterogen Atoms 1
Software Software Software Name Purpose XDS data reduction XSCALE data scaling SHELXD phasing SHELXE phasing REFMAC refinement