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Ultra-high resolution structure of hydrophobin HFBII
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1R2M PDB ENTRY 1R2M
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.39 298 0.2 M lithium sulfate, 15% PEG2000, 0.1 M sodium HEPES pH 7.5, manganese dichloride 50mM , pH 7.39, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.92 36.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.544 α = 90 b = 46.254 β = 111.64 c = 34.687 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2004-04-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7A 0.7747 EMBL/DESY, HAMBURG BW7A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.75 20 98.7 0.072 18.01 3.3 132282
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 0.75 0.76 91.3 0.587 1.91 4133
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS FREE R PDB ENTRY 1R2M 0.75 20 132282 7299 98.7 0.13 0.1295 0.1188 0.1482 0.1269 RANDOM 11.49
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 14 990 1222.35
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.228 s_approx_iso_adps 0.084 s_anti_bump_dis_restr 0.081 s_zero_chiral_vol 0.08 s_angle_d 0.066 s_similar_adp_cmpnt 0.047 s_bond_d 0.027 s_rigid_bond_adp_cmpnt 0.006 s_similar_dist s_from_restr_planes
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2082 Nucleic Acid Atoms Solvent Atoms 256 Heterogen Atoms 1
Software Software Software Name Purpose SHELX model building SHELXL-97 refinement DENZO data reduction SCALEPACK data scaling SHELX phasing