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Crystal structure of Mycobacterium tuberculosis enoyl reductase (InhA) inhibited by triclosan
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.8 295 PEG 4000, DMSO, ammonium acetate, NAD+, ADA, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.2 44.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.955 α = 90 b = 81.827 β = 95.69 c = 188.656 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2002-10-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X25 1.1 NSLS X25
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 10 87 63270 55089 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.37 82.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 10 63270 57972 2883 87.07 0.271 0.268 0.268 0.2772 0.334 0.3405 RANDOM 31.924
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.2 -0.33 -1.1 0.84
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.412 r_dihedral_angle_4_deg 22.591 r_dihedral_angle_3_deg 21.094 r_dihedral_angle_1_deg 6.457 r_scangle_it 1.845 r_angle_refined_deg 1.473 r_scbond_it 1.292 r_angle_other_deg 0.848 r_mcangle_it 0.836 r_mcbond_it 0.697
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.412 r_dihedral_angle_4_deg 22.591 r_dihedral_angle_3_deg 21.094 r_dihedral_angle_1_deg 6.457 r_scangle_it 1.845 r_angle_refined_deg 1.473 r_scbond_it 1.292 r_angle_other_deg 0.848 r_mcangle_it 0.836 r_mcbond_it 0.697 r_symmetry_vdw_other 0.256 r_symmetry_vdw_refined 0.235 r_symmetry_hbond_refined 0.226 r_nbd_refined 0.199 r_nbd_other 0.191 r_xyhbond_nbd_refined 0.185 r_nbtor_refined 0.176 r_mcbond_other 0.115 r_nbtor_other 0.088 r_chiral_restr 0.079 r_xyhbond_nbd_other 0.069 r_bond_refined_d 0.014 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11271 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 366
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction SCALEPACK data scaling AMoRE phasing CNS refinement