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Crystal structure of an 8 repeat consensus TPR superhelix
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5 295 MPD, CdCl2, NaAcetate, NaCl, pH 5.0, VAPOR DIFFUSION, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.3 62.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.245 α = 90 b = 54.245 β = 90 c = 71.782 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2004-08-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X6A 1.60 NSLS X6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.04 29.9 97.8 0.037 12784 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.04 2.11 94.1 0.237 7.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.04 29.9 6934 690 95.52 0.205 0.205 0.201 0.2156 0.241 0.2548 RANDOM 35.113
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.57 0.57 -1.15
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 9.257 r_scbond_it 7.342 r_dihedral_angle_1_deg 5.94 r_mcangle_it 4.819 r_mcbond_it 3.564 r_angle_refined_deg 2.026 r_angle_other_deg 1.115 r_symmetry_hbond_refined 0.717 r_symmetry_vdw_refined 0.559 r_xyhbond_nbd_refined 0.326
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 9.257 r_scbond_it 7.342 r_dihedral_angle_1_deg 5.94 r_mcangle_it 4.819 r_mcbond_it 3.564 r_angle_refined_deg 2.026 r_angle_other_deg 1.115 r_symmetry_hbond_refined 0.717 r_symmetry_vdw_refined 0.559 r_xyhbond_nbd_refined 0.326 r_nbd_other 0.26 r_nbd_refined 0.233 r_symmetry_vdw_other 0.223 r_chiral_restr 0.158 r_nbtor_other 0.093 r_metal_ion_refined 0.09 r_bond_refined_d 0.027 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 554 Nucleic Acid Atoms Solvent Atoms 24 Heterogen Atoms 2
Software Software Software Name Purpose RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing