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NMR structural analysis of Nop10p from Saccharomyces cerevisiae
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1mM yNop10p unlabelled; Sodium Acetate, KCl 90% H2O/10% D2O 50mM; 100mM 5.0 1 atm 298 2 2D NOESY 1mM yNop10p unlabelled; Sodium Acetate, KCl 100% D2O 50mM; 100mM 5.0 1 atm 298 3 3D_15N-separated_NOESY 1mM yNop10p 15N-labelled; Sodium Acetate, KCl 90% H2O/10% D2O 50mM; 100mM 5.0 1 atm 298 4 3D_13C-separated_NOESY 1mM yNop10p 15N,13C-labelled; Sodium Acetate, KCl 90% H2O/10% D2O 50mM; 100mM 5.0 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DMX 750 3 Varian INOVA 800
NMR Refinement Method Details Software torsion angle dynamics the structures are based on a total of 467 restraints, 422 are NOE-derived
distance constraints, 45 dihedral angle restraints CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Additional NMR Experimental Information Details Dihedral Restraints Derived from Talos Predicitons
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA v. 2.0 Guntert, P. 2 processing NMRPipe v. 2.3 Delaglio, F. 3 data analysis Sparky v. 3.110 Goddard, T.D. 4 data analysis TALOS v. 2003.027.13.05 Cornilescu, G.