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Structural Genomics, The crystal structure of a Phage protein (phBC6A51) from Bacillus cereus ATCC 14579
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9.5 298 1.26M (NH)4SO4, 0.1M CHES. 0.2M NaCl, pH 9.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.67 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.016 α = 90 b = 150.481 β = 90 c = 99.975 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-3 mirrors 2004-10-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9798 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 99.6 0.09 22.76 4.9 135664 134863 2 2 30.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 99.1 0.61 2 4.8 25899
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 39.1 128540 128090 6772 99.65 0.2065 0.2065 0.20494 0.2059 0.23581 0.202 RANDOM 30.437
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.43 -0.72 -0.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.969 r_dihedral_angle_4_deg 17.758 r_dihedral_angle_3_deg 15.683 r_dihedral_angle_1_deg 5.12 r_scangle_it 3.22 r_scbond_it 2.144 r_mcangle_it 1.326 r_angle_refined_deg 1.072 r_mcbond_it 0.826 r_nbtor_refined 0.294
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.969 r_dihedral_angle_4_deg 17.758 r_dihedral_angle_3_deg 15.683 r_dihedral_angle_1_deg 5.12 r_scangle_it 3.22 r_scbond_it 2.144 r_mcangle_it 1.326 r_angle_refined_deg 1.072 r_mcbond_it 0.826 r_nbtor_refined 0.294 r_symmetry_vdw_refined 0.239 r_nbd_refined 0.199 r_xyhbond_nbd_refined 0.196 r_symmetry_hbond_refined 0.146 r_chiral_restr 0.073 r_bond_refined_d 0.011 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8172 Nucleic Acid Atoms Solvent Atoms 971 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling CNS phasing