1ZFS
Solution structure of S100A1 bound to calcium
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 4D_13C-separated_NOESY | 0.5-3 mM S100A1 monomer, U-15N, 13C, 0.35 mM NaN3, 15 mM NaCl, 20 mM CaCl2, 25 mM Tris, 25 mM DTT, 10% D2O | 90% H2O/10% D2O | 15 mM | 7.2 | ambient | 310 | |
2 | 4D_13C/15N-separated_NOESY | 0.5-3 mM S100A1 monomer, U-15N, 13C, 0.35 mM NaN3, 15 mM NaCl, 20 mM CaCl2, 25 mM Tris, 25 mM DTT, 10% D2O | 90% H2O/10% D2O | 15 mM | 7.2 | ambient | 310 | |
3 | 3D_15N-separated_NOESY | 0.5-3 mM S100A1 monomer, U-15N, 13C, 0.35 mM NaN3, 15 mM NaCl, 20 mM CaCl2, 25 mM Tris, 25 mM DTT, 10% D2O | 90% H2O/10% D2O | 15 mM | 7.2 | ambient | 310 | |
4 | HNHA | 0.5-3 mM S100A1 monomer, U-15N, 13C, 0.35 mM NaN3, 15 mM NaCl, 20 mM CaCl2, 25 mM Tris, 25 mM DTT, 10% D2O | 90% H2O/10% D2O | 15 mM | 7.2 | ambient | 310 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry simulated annealing (DGSA) | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 19 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
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Details | RDC data using radially and axially compressed acrylamide gels were added into structure calculations. H-bonds were determined using hydrogen exchange experiments |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 2.9.3 | C.D. Schwieters, J.J. Kuszewski, N. Tjandra, G.M. Clore |
2 | refinement | X-PLOR | 2.9.3 | C.D. Schwieters, J.J. Kuszewski, N. Tjandra, G.M. Clore |