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1.5 A Crystal Structure of a Protein of Unknown Function PA1234 from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 298 0.1 M Tris, 0.2 M MgCl2, 28% PEG4000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.412 47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.686 α = 90 b = 75.818 β = 90 c = 90.999 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-2 mirrors 2004-11-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9797 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 50 97.4 0.068 30.88 8.5 27878 27153 2 2 15.682
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.55 83.6 0.351 2.72 6.7 2744
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.5 58.22 26480 25787 1365 97.38 0.19058 0.19058 0.18902 0.1882 0.22047 0.2227 RANDOM 15.682
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.74 -0.33 1.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.497 r_dihedral_angle_4_deg 19.635 r_dihedral_angle_3_deg 13.936 r_dihedral_angle_1_deg 4.865 r_scangle_it 3.233 r_scbond_it 2.001 r_angle_refined_deg 1.224 r_mcangle_it 1.203 r_mcbond_it 0.75 r_nbtor_refined 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.497 r_dihedral_angle_4_deg 19.635 r_dihedral_angle_3_deg 13.936 r_dihedral_angle_1_deg 4.865 r_scangle_it 3.233 r_scbond_it 2.001 r_angle_refined_deg 1.224 r_mcangle_it 1.203 r_mcbond_it 0.75 r_nbtor_refined 0.31 r_nbd_refined 0.193 r_symmetry_hbond_refined 0.186 r_xyhbond_nbd_refined 0.159 r_symmetry_vdw_refined 0.118 r_chiral_restr 0.081 r_metal_ion_refined 0.047 r_bond_refined_d 0.01 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1289 Nucleic Acid Atoms Solvent Atoms 257 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling