1Z30
NMR structure of the apical part of stemloop D from cloverleaf 1 of bovine enterovirus 1 RNA
SOLUTION NMR
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry, simulated annealing, energy minimisation | 518 upper limit distance constraints derived from NOE cross peaks, 184 torsion angle constraints defining 156 torsion angles, 36 hydrogen bond constraints | VNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy, target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 15 |
Representative Model | 5 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1, rev. c | Varian Inc. |
2 | processing | VNMR | 6.1, rev. c | Varian Inc. |
3 | data analysis | XEASY | 1.3.9 | Bartels |
4 | structure solution | CYANA | 1.0.6 | Herrmann |
5 | structure solution | FOUND | implemented in CYANA-1.0.6 | Guntert |
6 | refinement | OPAL | 2.6 | Luginbuhl |