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Crystal Structure of Putative Isomerase PA3332 from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.4 295 BIS-TRIS, Magnesium acetate, PEG3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.25 45.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.713 α = 90 b = 54.713 β = 90 c = 92.121 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2005-03-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9793 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.49 47.4 95.7 0.066 10 16.1 26280 25574
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.49 1.54 66.4 0.385 2.1 7.2 1721
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.49 47.4 22607 22607 2516 94.1 0.17152 0.17152 0.16778 0.1751 0.20492 0.2083 RANDOM 23.987
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.67 0.34 0.67 -1.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.959 r_dihedral_angle_4_deg 21.782 r_dihedral_angle_3_deg 13.688 r_dihedral_angle_1_deg 6.675 r_scangle_it 3.121 r_scbond_it 2.141 r_angle_refined_deg 1.423 r_mcangle_it 1.319 r_mcbond_it 0.798 r_symmetry_vdw_refined 0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.959 r_dihedral_angle_4_deg 21.782 r_dihedral_angle_3_deg 13.688 r_dihedral_angle_1_deg 6.675 r_scangle_it 3.121 r_scbond_it 2.141 r_angle_refined_deg 1.423 r_mcangle_it 1.319 r_mcbond_it 0.798 r_symmetry_vdw_refined 0.26 r_nbd_refined 0.222 r_symmetry_hbond_refined 0.191 r_xyhbond_nbd_refined 0.167 r_chiral_restr 0.099 r_metal_ion_refined 0.087 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1216 Nucleic Acid Atoms Solvent Atoms 213 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling HKL-3000 phasing