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Crystal Structure of A. fulgidus Lon proteolytic domain D508A mutant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 PEG 600, calcium acetate, sodium cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.82 32.52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.96 α = 90 b = 81.96 β = 90 c = 41.5 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2005-02-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.0 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 20 100 23366 23366 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.55 1.59 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.55 20 2 23366 23366 1181 100 0.21163 0.20925 0.2086 0.25623 0.2593 RANDOM 34.427
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.14 0.07 0.14 -0.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.269 r_dihedral_angle_3_deg 15.715 r_dihedral_angle_4_deg 13.692 r_dihedral_angle_1_deg 5.873 r_scangle_it 4.795 r_scbond_it 3.207 r_mcangle_it 2.306 r_angle_refined_deg 1.76 r_mcbond_it 1.481 r_nbtor_refined 0.317
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.269 r_dihedral_angle_3_deg 15.715 r_dihedral_angle_4_deg 13.692 r_dihedral_angle_1_deg 5.873 r_scangle_it 4.795 r_scbond_it 3.207 r_mcangle_it 2.306 r_angle_refined_deg 1.76 r_mcbond_it 1.481 r_nbtor_refined 0.317 r_symmetry_hbond_refined 0.296 r_symmetry_vdw_refined 0.247 r_nbd_refined 0.237 r_xyhbond_nbd_refined 0.234 r_chiral_restr 0.118 r_bond_refined_d 0.018 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1505 Nucleic Acid Atoms Solvent Atoms 141 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MAR345 data collection SCALEPACK data scaling AMoRE phasing