Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
Crystal structure of the human mineralocorticoid receptor ligand-binding domain bound to deoxycorticosterone and harboring the S810L mutation responsible for a severe form of hypertension
X-RAY DIFFRACTION
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
in silico model
Other
3D HOMOLOGY MODEL OF THE HUMAN MINERALOCORTICOID RECEPTOR LIGAND BINDING DOMAIN CONSTRUCTED USING THE PROGESTERONE RECEPTOR LIGAND BINDING DOMAIN STRUCTURE
Crystallization
Crystalization Experiments
ID
Method
pH
Temperature
Details
1
VAPOR DIFFUSION, HANGING DROP
7
297
PEG 4000, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 297K
Crystal Properties
Matthews coefficient
Solvent content
2.8
55.8
Crystal Data
Unit Cell
Length ( Å )
Angle ( ˚ )
a = 120.284
α = 90
b = 120.284
β = 90
c = 41.326
γ = 120
Symmetry
Space Group
P 31
Diffraction
Diffraction Experiment
ID #
Crystal ID
Scattering Type
Data Collection Temperature
Detector
Detector Type
Details
Collection Date
Monochromator
Protocol
1
1
x-ray
69
CCD
MARRESEARCH
MIRRORS
2003-11-02
M
SINGLE WAVELENGTH
Radiation Source
ID #
Source
Type
Wavelength List
Synchrotron Site
Beamline
1
SYNCHROTRON
ESRF BEAMLINE BM30A
0.979583
ESRF
BM30A
Data Collection
Overall
ID #
Resolution (High)
Resolution (Low)
Percent Possible (Observed)
R Merge I (Observed)
R Sym I (Observed)
Net I Over Average Sigma (I)
Redundancy
Number Reflections (All)
Number Reflections (Observed)
Observed Criterion Sigma (F)
Observed Criterion Sigma (I)
B (Isotropic) From Wilson Plot
1
1.96
18.3
97.5
0.094
0.079
6.6
3
40302
40302
18.3
Highest Resolution Shell
ID #
Resolution (High)
Resolution (Low)
Percent Possible (All)
Percent Possible (Observed)
R Merge I (Observed)
R-Sym I (Observed)
Mean I Over Sigma (Observed)
Redundancy
Number Unique Reflections (All)
1.96
2.07
86.4
0.431
0.318
2.1
1.5
6049
Refinement
Statistics
Diffraction ID
Structure Solution Method
Cross Validation method
Starting model
Resolution (High)
Resolution (Low)
Number Reflections (All)
Number Reflections (Observed)
Number Reflections (R-Free)
Percent Reflections (Observed)
R-Factor (All)
R-Factor (Observed)
R-Work (Depositor)
R-Work (DCC)
R-Free (Depositor)
R-Free (DCC)
R-Free Selection Details
Mean Isotropic B
X-RAY DIFFRACTION
MOLECULAR REPLACEMENT
THROUGHOUT
3D HOMOLOGY MODEL OF THE HUMAN MINERALOCORTICOID RECEPTOR LIGAND BINDING DOMAIN CONSTRUCTED USING THE PROGESTERONE RECEPTOR LIGAND BINDING DOMAIN STRUCTURE