1Y7X
Solution structure of a two-repeat fragment of major vault protein
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1mM MVP U-15N, 20mM bis-Tris, 150mM NaCl, 2mM CaCl2, 15mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM NaCl | 6.8 | ambient | 303 | |
2 | HNHA | 1mM MVP U-15N, 20mM bis-Tris, 150mM NaCl, 2mM CaCl2, 15mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM NaCl | 6.8 | ambient | 303 | |
3 | 2D NOESY | 1mM MVP, 20mM bis-Tris, 150mM NaCl, 2mM CaCl2, 15mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 150mM NaCl | 6.8 | ambient | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | The structures are based on a total of 1083 restraints, 930 are NOE-derived distance constraints, 124 dihedral angle restraints, 29 distance restraints from hydrogen bonds. | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard triple-resonance and homonuclear techniques. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.1 | Bruker Biospin |
2 | processing | XwinNMR | 2.1 | Bruker Biospin |
3 | data analysis | XEASY | 1.3.13 | Wuthrich |
4 | structure solution | CYANA | 1.0.6 | Guentert |
5 | refinement | Xplor-NIH | 2.9.2 | Clore |