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Structure of N-terminal domain IRSp53/BAIAP2
Crystallization Crystal Properties Matthews coefficient Solvent content 1.92 33.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.879 α = 90 b = 64.164 β = 106.18 c = 74.586 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2004-07-25 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.2 0.9781, 0.9776, 0.9649 SRS PX14.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 47.8 97.4 0.056 0.056 25.9 3.9 22459 22459 35.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.32 93.7 0.192 0.192 8.4 3.7 3133
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.2 47.8 21208 21208 1127 97.19 0.23021 0.23021 0.22831 0.26683 RANDOM 36.328
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.39 -1.54 -0.07 -2.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.113 r_dihedral_angle_3_deg 16.82 r_dihedral_angle_4_deg 15.757 r_dihedral_angle_1_deg 4.206 r_scangle_it 2.822 r_scbond_it 1.829 r_mcangle_it 1.06 r_angle_refined_deg 1.032 r_mcbond_it 0.723 r_nbtor_refined 0.289
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.113 r_dihedral_angle_3_deg 16.82 r_dihedral_angle_4_deg 15.757 r_dihedral_angle_1_deg 4.206 r_scangle_it 2.822 r_scbond_it 1.829 r_mcangle_it 1.06 r_angle_refined_deg 1.032 r_mcbond_it 0.723 r_nbtor_refined 0.289 r_nbd_refined 0.196 r_symmetry_vdw_refined 0.181 r_symmetry_hbond_refined 0.165 r_xyhbond_nbd_refined 0.155 r_chiral_restr 0.079 r_bond_refined_d 0.01 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3943 Nucleic Acid Atoms Solvent Atoms 221 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SOLVE phasing