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NMR structure of the first phd finger of autoimmune regulator protein (AIRE1): insights into apeced
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 1mM AIRE1-PHD1, U-15N,13C; 20mM phosphate buffer, pH 6.3, 150mM NaCl, 5mM DTT 90% H2O/10% D2O 150mM Nacl, 20mM phosphate buffer 6.3 ambient 295 2 3D_13C-separated_NOESY 3 HNHA 1mM AIRE1-PHD1, U-15N,13C; 20mM phosphate buffer, pH 6.3, 150mM NaCl, 5mM DTT 90% H2O/10% D2O 150mM Nacl, 20mM phosphate buffer 6.3 ambient 295
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DRX 600
NMR Refinement Method Details Software Structures were calculated using ARIA (1.2) in combination with CNS The AIRE1-PHD1 solution structure was determined from a total of 970 NMR-derived distance and 66 dihedral angle restraints, 44 residual dipolar NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details The first 4 amino acids (GAMA) do not belong to AIRE1 sequence.
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 3.0 Delaglio et al. 2 refinement CNS 1.0 3 structure solution ARIA aria1.2 Nilges et al. 4 data analysis XEASY 1.2 Bartels et al.