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Structure of the C-terminal domain from Trypanosoma brucei Variant Surface Glycoprotein MITat1.2
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-SEPARATED_NOESY 1MM 15N-LABELLED C-TERMINAL DOMAIN OF MITAT1.2, 50MM SODIUM PHOSPHATE, PH 6.5, 100MM SODIUM CHLORIDE, 0.05% SODIUM AZIDE, 90% H2O, 10% D2O; 1MM 15N,13C-LABELLED C- TERMINAL DOMAIN OF MITAT1.2, 50MM SODIUM PHOSPHATE, PH 6.5, 100MM SODIUM CHLORIDE, 0.05% SODIUM AZIDE, 90% H2O, 10% D2O 6.5 1 ATMOSPHERE ATM 298 2 3D_ 13C-SEPARATED_NOESY 1MM 15N-LABELLED C-TERMINAL DOMAIN OF MITAT1.2, 50MM SODIUM PHOSPHATE, PH 6.5, 100MM SODIUM CHLORIDE, 0.05% SODIUM AZIDE, 90% H2O, 10% D2O; 1MM 15N,13C-LABELLED C- TERMINAL DOMAIN OF MITAT1.2, 50MM SODIUM PHOSPHATE, PH 6.5, 100MM SODIUM CHLORIDE, 0.05% SODIUM AZIDE, 90% H2O, 10% D2O 6.5 1 ATMOSPHERE ATM 298 3 CLEANEX 1MM 15N-LABELLED C-TERMINAL DOMAIN OF MITAT1.2, 50MM SODIUM PHOSPHATE, PH 6.5, 100MM SODIUM CHLORIDE, 0.05% SODIUM AZIDE, 90% H2O, 10% D2O; 1MM 15N,13C-LABELLED C- TERMINAL DOMAIN OF MITAT1.2, 50MM SODIUM PHOSPHATE, PH 6.5, 100MM SODIUM CHLORIDE, 0.05% SODIUM AZIDE, 90% H2O, 10% D2O 6.5 1 ATMOSPHERE ATM 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DRX 600
NMR Refinement Method Details Software TORSION ANGLE DYNAMICS, SIMULATED ANNEALING 719 UNAMBIGUOUS AND 121 AMBIGUOUS NON-DEGENERATE DISTANCE RESTRAINTS, 24 PAIRS OF DIHEDRAL RESTRAINTS FROM TALOS, AND 20 HYDROGEN BONDS. ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 60 Representative Model 1 (n/a)
Computation: NMR Software # Classification Version Software Name Author 1 refinement ARIA 1.1 NILGES 2 structure solution Azara 2.7 3 structure solution ANSIG 3.3 4 structure solution CNS 1.1 5 structure solution ARIA 1.1