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Crystal Structures of Protein Kinase B Selective Inhibitors in Complex with Protein Kinase A and Mutants
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.4 278 LiCl, MesBisTris, methanol, MEGA-8, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 278K
Crystal Properties Matthews coefficient Solvent content 2.32 47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.658 α = 90 b = 73.111 β = 90 c = 78.15 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2002-11-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 1.00076 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 22.53 46943 46943
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 22.53 44536 2404 92.59 0.20168 0.19986 0.2356 RANDOM 13.429
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.18 -0.46 0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.38 r_scangle_it 3.681 r_scbond_it 2.354 r_mcangle_it 1.488 r_angle_refined_deg 1.421 r_angle_other_deg 0.823 r_mcbond_it 0.82 r_symmetry_hbond_refined 0.412 r_symmetry_vdw_other 0.288 r_nbd_other 0.245
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.38 r_scangle_it 3.681 r_scbond_it 2.354 r_mcangle_it 1.488 r_angle_refined_deg 1.421 r_angle_other_deg 0.823 r_mcbond_it 0.82 r_symmetry_hbond_refined 0.412 r_symmetry_vdw_other 0.288 r_nbd_other 0.245 r_nbd_refined 0.215 r_xyhbond_nbd_refined 0.178 r_symmetry_vdw_refined 0.144 r_chiral_restr 0.092 r_nbtor_other 0.085 r_bond_refined_d 0.014 r_gen_planes_refined 0.008 r_gen_planes_other 0.006 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2961 Nucleic Acid Atoms Solvent Atoms 398 Heterogen Atoms 42
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing