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Solution Structure of the SMRT Deacetylase Activation Domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 DQF-COSY 1-2mM DAD, 50mM NaCl, 50mM phosphate buffer NA 100% D2O 0.35 M 6.8 ambient 290 2 DQ-correlation 1-2mM DAD, 50mM NaCl, 50mM phosphate buffer NA 100% D2O 0.35 M 6.8 ambient 290 3 2D TOCSY 1-2mM DAD, 50mM NaCl, 50mM phosphate buffer NA 93% H2O/7% D2O 0.35 M 6.8 ambient 290 4 2D NOESY 1-2mM DAD, 50mM NaCl, 50mM phosphate buffer NA 93% H2O/7% D2O 0.35 M 6.8 ambient 290 5 3D_15N-separated_TOCSY 1-2mM DAD U-15N, 50mM NaCl, 50mM phosphate buffer NA 93% H2O/7% D2O 0.35 M 6.8 ambient 290 6 3D_15N-separated_NOESY 1-2mM DAD U-15N, 50mM NaCl, 50mM phosphate buffer NA 93% H2O/7% D2O 0.35 M 6.8 ambient 290
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker DMX 600 3 Bruker DRX 500
NMR Refinement Method Details Software Simulated annealing protocol supplied with the program CNS XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 28 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details This structure was determined using a combination of standard 2D homonuclear techniques and 3D 15N TOCSY-HSQC and 15N NOESY-HSQC
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR Bruker GmbH, Karlsruhe, Germany 2 processing NMRPipe 02/2000 Frank Delaglio Stephan Grzesiek, Guang Zhu, Geerten W. Vuister, John Pfeifer, Ad Bax 3 data analysis Sparky 3.106 T.D. Goddard, D.G. Kneller 4 structure solution CNS 1.1 5 refinement CNS 1.1