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CRYSTAL STRUCTURE OF a DUF72 family protein (EF0366) FROM ENTEROCOCCUS FAECALIS V583 AT 2.52 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP, NANODROP 4.5 277 10.0% PEG-3000, 0.2M Zn(OAc)2, 0.1M Acetate, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K, pH 4.5
Crystal Properties Matthews coefficient Solvent content 3.44 63.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.079 α = 90 b = 114.079 β = 90 c = 52.307 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2004-08-27 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 0.979694, 0.979571, 1.019859 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.52 28.52 99.9 0.18 9.1 6.5 13332 53.06
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.52 2.66 100 0.01038 1.8 6.5 1939
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.52 28.52 12658 657 99.89 0.22652 0.22493 0.2253 0.25697 0.261 RANDOM 38.918
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.01 -1.01 -2.01 3.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.524 r_dihedral_angle_4_deg 23.097 r_dihedral_angle_3_deg 15.235 r_dihedral_angle_1_deg 6.34 r_scangle_it 1.653 r_angle_refined_deg 1.306 r_scbond_it 1.246 r_mcangle_it 0.614 r_mcbond_it 0.383 r_nbtor_refined 0.307
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.524 r_dihedral_angle_4_deg 23.097 r_dihedral_angle_3_deg 15.235 r_dihedral_angle_1_deg 6.34 r_scangle_it 1.653 r_angle_refined_deg 1.306 r_scbond_it 1.246 r_mcangle_it 0.614 r_mcbond_it 0.383 r_nbtor_refined 0.307 r_symmetry_hbond_refined 0.262 r_nbd_refined 0.197 r_symmetry_vdw_refined 0.155 r_xyhbond_nbd_refined 0.123 r_chiral_restr 0.085 r_bond_refined_d 0.011 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1998 Nucleic Acid Atoms Solvent Atoms 37 Heterogen Atoms 8
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHARP phasing REFMAC refinement CCP4 data scaling