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Crystal Structure of Hemolytic Lectin CEL-III
Crystallization Crystal Properties Matthews coefficient Solvent content 2.02 38.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.42 α = 90 b = 65.37 β = 98.18 c = 126.02 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-05-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-6A 1.00000 Photon Factory BL-6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 26.2 92828 92828
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.7 1.79 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 1.7 26.17 88165 4642 99.94 0.167 0.167 0.16519 0.1794 0.20116 0.2142 RANDOM 13.29
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.39 0.64 0.64 -0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.58 r_scangle_it 3.215 r_scbond_it 2.006 r_mcangle_it 1.485 r_angle_refined_deg 1.365 r_mcbond_it 0.837 r_angle_other_deg 0.79 r_symmetry_vdw_other 0.331 r_nbd_other 0.252 r_metal_ion_refined 0.215
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.58 r_scangle_it 3.215 r_scbond_it 2.006 r_mcangle_it 1.485 r_angle_refined_deg 1.365 r_mcbond_it 0.837 r_angle_other_deg 0.79 r_symmetry_vdw_other 0.331 r_nbd_other 0.252 r_metal_ion_refined 0.215 r_nbd_refined 0.198 r_symmetry_hbond_refined 0.165 r_xyhbond_nbd_refined 0.158 r_symmetry_vdw_refined 0.085 r_chiral_restr 0.084 r_nbtor_other 0.082 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6626 Nucleic Acid Atoms Solvent Atoms 846 Heterogen Atoms 30
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SHARP phasing