1T6A

Crystal Structure of Protein of Unknown Function from Bacillus stearothermophilus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7294Bis-Tris-Propane, Sodium Nitrate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystal Properties
Matthews coefficientSolvent content
4.169.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 77.307α = 90
b = 77.307β = 90
c = 200.41γ = 120
Symmetry
Space GroupH 3 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC-22004-04-12MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.97952APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.054099.30.08822.49.91486114757
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.052.194.30.4322.075.81010

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSAD2.0540147541400874699.710.196180.196180.194290.22462random30.926
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.770.881.77-2.65
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.624
r_scangle_it4.435
r_scbond_it2.592
r_mcangle_it1.639
r_angle_other_deg1.305
r_angle_refined_deg1.232
r_mcbond_it0.834
r_symmetry_vdw_other0.307
r_nbd_other0.231
r_xyhbond_nbd_refined0.216
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.624
r_scangle_it4.435
r_scbond_it2.592
r_mcangle_it1.639
r_angle_other_deg1.305
r_angle_refined_deg1.232
r_mcbond_it0.834
r_symmetry_vdw_other0.307
r_nbd_other0.231
r_xyhbond_nbd_refined0.216
r_nbd_refined0.192
r_symmetry_hbond_refined0.184
r_symmetry_vdw_refined0.139
r_nbtor_other0.081
r_chiral_restr0.07
r_bond_refined_d0.011
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms997
Nucleic Acid Atoms
Solvent Atoms100
Heterogen Atoms4

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SHELXDphasing
SOLVEphasing
RESOLVEphasing