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STRUCTURAL BASIS FOR THE AUTOINHIBITION AND STI-571 INHIBITION OF C-KIT TYROSINE KINASE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 275 PHOSPHATE, pH 8.50, VAPOR DIFFUSION, SITTING DROP, temperature 275K
Crystal Properties Matthews coefficient Solvent content 2.4 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.089 α = 90 b = 70.089 β = 90 c = 127.88 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 MIRRORS 2003-11-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.3 1.00 ALS 5.0.3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 30 98.4 0.028 19.3 4.6 48006 48006 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.66 90 0.367 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 20 45483 45483 2406 98.39 0.18963 0.18963 0.1884 0.212 0.21291 0.2343 RANDOM 23.459
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.18 0.59 1.18 -1.78
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.05 r_scangle_it 2.825 r_mcangle_it 2.471 r_scbond_it 1.866 r_mcbond_it 1.481 r_angle_refined_deg 1.085 r_nbd_refined 0.193 r_symmetry_vdw_refined 0.165 r_symmetry_hbond_refined 0.153 r_xyhbond_nbd_refined 0.118
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.05 r_scangle_it 2.825 r_mcangle_it 2.471 r_scbond_it 1.866 r_mcbond_it 1.481 r_angle_refined_deg 1.085 r_nbd_refined 0.193 r_symmetry_vdw_refined 0.165 r_symmetry_hbond_refined 0.153 r_xyhbond_nbd_refined 0.118 r_chiral_restr 0.075 r_bond_refined_d 0.007 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2381 Nucleic Acid Atoms Solvent Atoms 268 Heterogen Atoms 47
Software Software Software Name Purpose HKL-2000 data collection SCALEPACK data scaling AMoRE phasing REFMAC refinement HKL-2000 data reduction