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Crystal structure of the Rattus norvegicus voltage gated calcium channel beta subunit isoform 2a
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 281 Tris-Cl, NaCl, PEG 4000, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 281K
Crystal Properties Matthews coefficient Solvent content 2.3 45.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 36.176 α = 107.34 b = 45.26 β = 95.75 c = 58.701 γ = 97
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2004-01-18 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.0199, 0.9796 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.97 30 100 0.069 27.51 5.19 24274 24274 1 1 31.255
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.97 2.04 96.5 0.305 2.45 2.17 2402
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.97 55.05 24274 22945 1214 97.83 0.18693 0.18547 0.21321 0.2531 RANDOM 23.714
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.17 -0.31 0.32 -0.41 -0.4 0.33
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.165 r_scangle_it 4.988 r_scbond_it 2.983 r_mcangle_it 1.744 r_angle_refined_deg 1.48 r_mcbond_it 0.911 r_angle_other_deg 0.84 r_symmetry_vdw_other 0.286 r_nbd_other 0.24 r_nbd_refined 0.212
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.165 r_scangle_it 4.988 r_scbond_it 2.983 r_mcangle_it 1.744 r_angle_refined_deg 1.48 r_mcbond_it 0.911 r_angle_other_deg 0.84 r_symmetry_vdw_other 0.286 r_nbd_other 0.24 r_nbd_refined 0.212 r_symmetry_vdw_refined 0.17 r_xyhbond_nbd_refined 0.147 r_symmetry_hbond_refined 0.104 r_nbtor_other 0.088 r_chiral_restr 0.085 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_gen_planes_other 0.003 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2228 Nucleic Acid Atoms Solvent Atoms 148 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling CNS phasing