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Crystal structure of calcium ATPase with two bound calcium ions
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICRODIALYSIS 6.1 Sodium butylate, pH 6.10, MICRODIALYSIS
Crystal Properties Matthews coefficient Solvent content 3.55 63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 165.89 α = 90 b = 64.34 β = 98.08 c = 147.14 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm Karkpatric-Boetze type RH-Coated double mirror 1998-12-03 M SINGLE WAVELENGTH 2 1 x-ray IMAGE PLATE RIGAKU RAXIS IV PT-Coated bent-cyrindrica double mirror 1999-10-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 0.80 SPring-8 BL41XU 2 SYNCHROTRON SPRING-8 BEAMLINE BL44B2 1.00 SPring-8 BL44B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.4 20 95.9 0.055 35.06 9 57973 -3 36.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.4 2.46 69 0.296 2.9 2.25 2753
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MULTIPLE ISOMORPHOUS REPLACEMENT USING ANOMALOUS SIGNALS FROM HEAVY ATOMS THROUGHOUT 2.4 15 2 57813 57419 5843 95.2 0.251 0.246 0.246 0.283 RANDOM 61
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 11.5 2.27 -2.24
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 22.6 c_scangle_it 3.79 c_mcangle_it 3.2 c_scbond_it 2.66 c_mcbond_it 2 c_angle_deg 1.3 c_improper_angle_d 0.84 c_bond_d 0.007 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 22.6 c_scangle_it 3.79 c_mcangle_it 3.2 c_scbond_it 2.66 c_mcbond_it 2 c_angle_deg 1.3 c_improper_angle_d 0.84 c_bond_d 0.007 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7671 Nucleic Acid Atoms Solvent Atoms 117 Heterogen Atoms 3
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling MLPHARE phasing CNS refinement DENZO data reduction SCALEPACK data scaling