Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
NMR STRUCTURE OF D(GCATATGATAG)(DOT)D(CTATCATATGC): A CONSENSUS SEQUENCE FOR PROMOTERS RECOGNIZED BY SIGMA-K RNA POLYMERASE, 4 STRUCTURES
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
NOESY
H2O AND D2O
0.5 M
7.0
1 ATMOSPHERE
298
2
COSY
H2O AND D2O
0.5 M
7.0
1 ATMOSPHERE
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AMX600
600
NMR Refinement
Method
Details
Software
MOLECULAR DYNAMIC (RMD) AND MONTE CARLO (RMC) CALCULATIONS
REFINEMENT DETAILS CAN BE FOUND IN THE BIOCHEMISTRY CITATION ABOVE. MODEL 1 : REFINED BY RMD FROM A-DNA MODEL 2 : REFINED BY RMD FROM B-DNA MODEL 3 : REFINED BY RMC FROM A-DNA MODEL 4 : REFINED BY RMC FROM B-DNA
MARDIGRAS
NMR Ensemble Information
Conformer Selection Criteria
CONVERGENCE, R FACTORS, ENERGIES
Conformers Calculated Total Number
20
Conformers Submitted Total Number
4
Additional NMR Experimental Information
Details
STRUCTURE DETERMINED WITH HOMONUCLEAR NMR METHODS.