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Crystal structure and mechanism of a bacterial fluorinating enzyme, product complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.2 293 22% PEG 1000, 0.1M phosphate-citrate, 0.2M Li2SO4, pH 4.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.32 46.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.184 α = 90 b = 129.923 β = 90 c = 183.872 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2 Mirrors 2003-03-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 0.9786 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.67 53.64 99 0.085 0.064 3 6.3 26303 26003 5.967 5.4 47.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.67 2.74 99 0.176 0.133 5.4 3.5 1821
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (I) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.67 91.29 3.5 5.96 26303 24648 1322 98.81 0.231 0.17627 0.17329 0.1804 0.2318 0.2395 RANDOM 23.058
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.03 -0.26 -0.77
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.51 r_scangle_it 2.217 r_angle_refined_deg 1.378 r_scbond_it 1.334 r_mcangle_it 0.901 r_angle_other_deg 0.856 r_mcbond_it 0.475 r_symmetry_vdw_refined 0.246 r_nbd_other 0.235 r_symmetry_vdw_other 0.208
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.51 r_scangle_it 2.217 r_angle_refined_deg 1.378 r_scbond_it 1.334 r_mcangle_it 0.901 r_angle_other_deg 0.856 r_mcbond_it 0.475 r_symmetry_vdw_refined 0.246 r_nbd_other 0.235 r_symmetry_vdw_other 0.208 r_nbd_refined 0.19 r_symmetry_hbond_refined 0.161 r_xyhbond_nbd_refined 0.153 r_nbtor_other 0.104 r_chiral_restr 0.072 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6660 Nucleic Acid Atoms Solvent Atoms 159 Heterogen Atoms 84
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SOLVE phasing RESOLVE phasing