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A SHORT LEXITROPSIN THAT RECOGNIZES THE DNA MINOR GROOVE AT 5'-ACTAGT-3': UNDERSTANDING THE ROLE OF ISOPROPYL-THIAZOLE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2.4mM DNA duplex with 2 equivalents of AIK13/20 ligand, 90% H2O, 10% D2O 90% H2O/10% D2O 100mM NaCl 7.0 1 atm 298 2 2D TOCSY 2.4mM DNA duplex with 2 equivalents of AIK13/20 ligand, 90% H2O, 10% D2O 90% H2O/10% D2O 100mM NaCl 7.0 1 atm 298 3 DQF-COSY 2.4mM DNA duplex with 2 equivalents of AIK13/20 ligand, 90% H2O, 10% D2O 90% H2O/10% D2O 100mM NaCl 7.0 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 600 3 Bruker AVANCE 600 4 Bruker AMX 400
NMR Refinement Method Details Software Restrained Molecular Dynamics SYBYL
NMR Ensemble Information Conformer Selection Criteria Conformers Calculated Total Number Conformers Submitted Total Number 1 Representative Model 1 (minimized average structure)
Additional NMR Experimental Information Details The structure was determined using standard 2D homonuclear techniques
Computation: NMR Software # Classification Version Software Name Author 1 iterative matrix relaxation SYBYL 6.3 TRIPOS INC. 2 collection XwinNMR 3.0 Bruker 3 collection VNMR 6 Varian 4 refinement SYBYL 6.3 TRIPOS INC. 5 data analysis Sparky 3.105 Goddard & Kneller