1RI0
NMR structure of the N-terminal hath domain of human HDGF
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 2 to 3mM 15N and 13C uniform labeled protein, 100mM phosphate buffer, 150mM NaCl, 1mM EDTA | 95% H2O/5% D2O | 6.0 | ambient | 298 | ||
2 | 3D_13C-separated_NOESY | 2 to 3mM 15N and 13C uniform labeled protein, 100mM phosphate buffer, 150mM NaCl, 1mM EDTA | 95% H2O/5% D2O | 6.0 | ambient | 298 | ||
3 | HNHA | 2 to 3mM 15N and 13C uniform labeled protein, 100mM phosphate buffer, 150mM NaCl, 1mM EDTA | 95% H2O/5% D2O | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics | The structures are based on a total of 1507 restraints, including 1245 NOE-derived distance constraints, 196 dihedral angle restraints, 66 distance restraints of hydrogen bonds. | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Additional NMR Experimental Information | |
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Details | The structure was determined by using standard triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | 3.1 | Bruker |
2 | data analysis | AURELIA | 2.8.13 | Bruker |
3 | structure solution | CYANA | 1.0.5 | Peter Guntert, Torsten Herrmann |
4 | refinement | CYANA | 1.0.5 | Peter Guntert, Torsten Herrmann |