1RDE

NMR structure of the thrombin-binding DNA aptamer stabilized by Sr2+


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1mM strand, natural abundant, no buffer100% D2O>3mM4.7ambient288
22D TOCSY1mM strand, natural abundant, no buffer100% D2O>3mM4.7ambient288
3E-COSY1mM strand, natural abundant, no buffer100% D2O>3mM4.7ambient288
4P31-H1 COSY1mM strand, natural abundant, no buffer100% D2O>3mM4.7ambient288
5ROESY1mM strand, natural abundant, no buffer100% D2O>3mM4.7ambient288
62D NOESY1mM strand, natural abundant, no buffer, 90% H2O, 10% D2O90% H2O/10% D2O>3mM4.7ambient288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number11
Conformers Submitted Total Number11
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionCNS1.1Brunger, A.T.
2refinementCNSBrunger, A.T.