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Crystal Structure of a mu-like calpain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.25 295 PEG 6000,morpholino ethane sulfonic acid, sodium chloride, n-nonyl-beta-D-maltoside , pH 6.25, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.75 55.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.738 α = 90 b = 184.596 β = 100.74 c = 86.37 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-05-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 0.916117 CHESS F1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 50 91.1 50621 50621
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.7 2.8 81.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.8 91.29 47780 47780 2550 91.6 0.2329 0.23294 0.22877 0.2324 0.31089 RANDOM 49.683
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.4 1.47 1.09 -0.14
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 10.702 r_dihedral_angle_1_deg 10.191 r_scbond_it 7.38 r_mcangle_it 5.565 r_angle_refined_deg 4.43 r_mcbond_it 3.341 r_angle_other_deg 1.871 r_symmetry_hbond_refined 0.477 r_symmetry_vdw_refined 0.435 r_symmetry_vdw_other 0.368
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 10.702 r_dihedral_angle_1_deg 10.191 r_scbond_it 7.38 r_mcangle_it 5.565 r_angle_refined_deg 4.43 r_mcbond_it 3.341 r_angle_other_deg 1.871 r_symmetry_hbond_refined 0.477 r_symmetry_vdw_refined 0.435 r_symmetry_vdw_other 0.368 r_nbd_refined 0.34 r_nbd_other 0.32 r_chiral_restr 0.284 r_xyhbond_nbd_refined 0.277 r_nbtor_other 0.144 r_bond_refined_d 0.074 r_gen_planes_refined 0.024 r_gen_planes_other 0.023 r_bond_other_d 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12056 Nucleic Acid Atoms Solvent Atoms 312 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing