1QD3
HIV-1 TAR RNA/NEOMYCIN B COMPLEX
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NOESY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| 2 | COSY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| 3 | TOCSY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| 4 | HSQC-NOESY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| 5 | HCCH-COSY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| 6 | HCCH-TOCSY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| 7 | XFILTERED-NOESY | D2O | 110 mM | 6.4 | 1 atm | 308 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX600 | 600 |
| 2 | Bruker | DMX750 | 750 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | X-PLOR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | LOWEST ENERGY, AGREEMENT WITH EXPERIMENTAL DATA |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 17 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | X-PLOR | 3.851 | BRUNGER |
| 2 | structure solution | NDEE | ||
| 3 | structure solution | Xndee | ||
| 4 | structure solution | XPLOR | ||
