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Zn-binding domain of the T347G mutant of human aminoacylase-I
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 293 PEG8000, (NH4)2SO4, CoCl2, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.04 39.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.528 α = 90 b = 67.249 β = 90 c = 146.479 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-04-20 M SAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X8C 1.005685 NSLS X8C
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 1.4 33.71 102135 102135 1037 100 0.133 0.13299 0.1326 0.17208 0.1607 RANDOM 15.204
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.55 0.65 -0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 11.25 r_sphericity_free 6.655 r_dihedral_angle_1_deg 6.186 r_scangle_it 5.113 r_sphericity_bonded 4.733 r_scbond_it 3.616 r_mcangle_it 2.72 r_mcbond_it 1.927 r_angle_refined_deg 1.89 r_rigid_bond_restr 1.859
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 11.25 r_sphericity_free 6.655 r_dihedral_angle_1_deg 6.186 r_scangle_it 5.113 r_sphericity_bonded 4.733 r_scbond_it 3.616 r_mcangle_it 2.72 r_mcbond_it 1.927 r_angle_refined_deg 1.89 r_rigid_bond_restr 1.859 r_symmetry_vdw_refined 0.368 r_symmetry_hbond_refined 0.3 r_nbd_refined 0.208 r_xyhbond_nbd_refined 0.144 r_chiral_restr 0.142 r_bond_refined_d 0.023 r_gen_planes_refined 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4446 Nucleic Acid Atoms Solvent Atoms 667 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing