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Crystal structure of human glutathione transferase (GST) A1-1 in complex with a decarboxy-glutathione
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.8 293 PEG 4000, Tris-HCl, DTT, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.23 44.81
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.505 α = 90 b = 90.247 β = 93.67 c = 51.13 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2001-02-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 1.0793 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 25 45143 43853 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.75 1.81 95.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.75 67.42 43853 39448 4393 96.93 0.15241 0.14833 0.162 0.18938 0.198 RANDOM 12.962
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.03 0.31 -0.02 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.523 r_scangle_it 3.912 r_scbond_it 2.378 r_angle_refined_deg 1.553 r_mcangle_it 1.521 r_angle_other_deg 0.962 r_mcbond_it 0.852 r_nbd_other 0.243 r_nbd_refined 0.221 r_symmetry_vdw_other 0.199
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.523 r_scangle_it 3.912 r_scbond_it 2.378 r_angle_refined_deg 1.553 r_mcangle_it 1.521 r_angle_other_deg 0.962 r_mcbond_it 0.852 r_nbd_other 0.243 r_nbd_refined 0.221 r_symmetry_vdw_other 0.199 r_symmetry_vdw_refined 0.141 r_symmetry_hbond_refined 0.141 r_xyhbond_nbd_refined 0.137 r_chiral_restr 0.097 r_nbtor_other 0.095 r_bond_refined_d 0.015 r_gen_planes_refined 0.008 r_gen_planes_other 0.004 r_bond_other_d 0.003 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3616 Nucleic Acid Atoms Solvent Atoms 603 Heterogen Atoms 54
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling CNS phasing