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BACTERIORHODOPSIN N' INTERMEDIATE AT 1.62 A RESOLUTION
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1M0L PDB ENTRY 1M0L
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 CUBIC LIPID PHASE 5.6 295 MONO-OLEIN, POTASSIUM PHOSPHATE, pH 5.60, CUBIC LIPID PHASE, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.78 30.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.981 α = 90 b = 60.981 β = 90 c = 108.312 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-11-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.933 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.62 25 96.8 0.05 35.7 28071 28071 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.62 1.68 95.9 0.668 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R PDB ENTRY 1M0L 1.62 25 28029 24048 1443 96.8 0.1712 0.1619 0.2055 THIN SHELLS
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 237 2072.48
RMS Deviations Key Refinement Restraint Deviation s_anti_bump_dis_restr 0.048 s_angle_d 0.046 s_zero_chiral_vol 0.046 s_non_zero_chiral_vol 0.046 s_from_restr_planes 0.0224 s_bond_d 0.015
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1718 Nucleic Acid Atoms Solvent Atoms 27 Heterogen Atoms 330
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELXL-97 model building SHELXL-97 refinement SHELXL-97 phasing