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Targeting tuberculosis and malaria through inhibition of enoyl reductase: compound activity and structural data
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 291 100 mM Tris, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 4.1 69.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 94.822 α = 90 b = 104.12 β = 90 c = 189.746 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD ADSC QUANTUM 4 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C 1.0 APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 30 27704
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 30 26302 1401 94.85 0.2283 0.22509 0.2276 0.28969 0.2872 RANDOM 50.889
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.4 5.74 -5.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 11.34 r_scangle_it 4.978 r_scbond_it 3.122 r_angle_refined_deg 2.94 r_mcangle_it 1.968 r_angle_other_deg 1.341 r_mcbond_it 1.08 r_symmetry_vdw_other 0.306 r_nbd_refined 0.265 r_nbd_other 0.264
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 11.34 r_scangle_it 4.978 r_scbond_it 3.122 r_angle_refined_deg 2.94 r_mcangle_it 1.968 r_angle_other_deg 1.341 r_mcbond_it 1.08 r_symmetry_vdw_other 0.306 r_nbd_refined 0.265 r_nbd_other 0.264 r_xyhbond_nbd_refined 0.229 r_symmetry_vdw_refined 0.21 r_chiral_restr 0.16 r_nbtor_other 0.11 r_symmetry_hbond_refined 0.091 r_bond_refined_d 0.031 r_gen_planes_other 0.016 r_gen_planes_refined 0.013 r_bond_other_d 0.011 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3987 Nucleic Acid Atoms Solvent Atoms 45 Heterogen Atoms 139
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling CNS refinement DENZO data reduction CNS phasing