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Crystal structure of Bacillus subtilis levansucrase
Crystallization Crystal Properties Matthews coefficient Solvent content 2.1 41.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.11 α = 90 b = 67.014 β = 90 c = 123.681 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-12-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 1.18 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 30 98.4 0.091 5.1 67836 9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 1.5 30 2 64231 64231 3386 98.23 0.1655 0.16499 0.1668 0.17508 0.1778 RANDOM 4.176
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.34 0.07 0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.285 r_scangle_it 1.656 r_angle_refined_deg 1.078 r_scbond_it 1.059 r_angle_other_deg 0.73 r_mcangle_it 0.567 r_mcbond_it 0.291 r_symmetry_vdw_other 0.252 r_nbd_other 0.236 r_nbd_refined 0.197
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.285 r_scangle_it 1.656 r_angle_refined_deg 1.078 r_scbond_it 1.059 r_angle_other_deg 0.73 r_mcangle_it 0.567 r_mcbond_it 0.291 r_symmetry_vdw_other 0.252 r_nbd_other 0.236 r_nbd_refined 0.197 r_symmetry_vdw_refined 0.135 r_symmetry_hbond_refined 0.117 r_xyhbond_nbd_refined 0.085 r_nbtor_other 0.08 r_chiral_restr 0.07 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3442 Nucleic Acid Atoms Solvent Atoms 366 Heterogen Atoms 29
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SOLVE phasing