1OHN
Three-dimensional structure in lipid micelles of the pediocin-like antimicrobial peptide sakacin P.
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 250 MM DPC/10% D2O/0.1% TFA/1MM PEPTIDE | 2.8 | 298 | ||||
2 | TOCSY | 250 MM DPC/10% D2O/0.1% TFA/1MM PEPTIDE | 2.8 | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
MOLECULAR DYNAMICS/ SIMULATED ANNEALING | AMBER 6, SAN FRANCISCO, UNIVERSITY OF CALIFORNIA, 1999. | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | LEAST RESTRAIN VIOLATION AND OVERALL ENERGY |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
---|---|
Details | THE STRUCTURES WERE DETERMINED USING A COMBINATION OF 1H NMR SPECTROSCOPIC METHODS FOLLOWED BY DISTANCE GEOMETRY/SIMULATED ANNEALING CALCULATIONS. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | Amber | 6 | CASE, D.A., PEARLMAN, D.A., CALDWELL, III, J.C., ET AL. |
2 | structure solution | ARIA | ||
3 | structure solution | Amber |