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Dex49A from Penicillium minioluteum complex with isomaltose
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 0.1M SODIUM ACETATE PH5.5, 0.1M NACL,10MM CACL2,20 PERCENT MMEPEG 5000, pH 5.50
Crystal Properties Matthews coefficient Solvent content 2.5 51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 115.405 α = 90 b = 103.773 β = 90 c = 49.74 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 287 CCD MARRESEARCH 2002-06-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 27.5 99.2 0.082 7.7 3.6 71784
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.65 1.74 99.2 0.377 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.65 25.73 68116 3613 99.1 0.188 0.1985 0.215 0.2227 RANDOM 19.21
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.039 r_scangle_it 2.271 r_scbond_it 1.481 r_angle_refined_deg 1.267 r_mcangle_it 1.104 r_angle_other_deg 0.792 r_mcbond_it 0.624 r_symmetry_vdw_other 0.295 r_nbd_other 0.244 r_symmetry_hbond_refined 0.207
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.039 r_scangle_it 2.271 r_scbond_it 1.481 r_angle_refined_deg 1.267 r_mcangle_it 1.104 r_angle_other_deg 0.792 r_mcbond_it 0.624 r_symmetry_vdw_other 0.295 r_nbd_other 0.244 r_symmetry_hbond_refined 0.207 r_nbd_refined 0.189 r_xyhbond_nbd_refined 0.134 r_symmetry_vdw_refined 0.107 r_nbtor_other 0.079 r_chiral_restr 0.078 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_gen_planes_other 0.004 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4391 Nucleic Acid Atoms Solvent Atoms 508 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling MLPHARE phasing