1NWN

Crystals of CO-HbI in which the structure was converted to its unligated state, and then converted back to its original CO-ligated state.


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 3SDHPDB entry 3SDH

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1SMALL TUBES7.5296Sodium and Potassium phosphate, pH 7.5, SMALL TUBES, temperature 296K
Crystal Properties
Matthews coefficientSolvent content
2.1642.71

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 92.62α = 90
b = 43.51β = 121.88
c = 83.11γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray298IMAGE PLATERIGAKU RAXIS IICYale mirrors2001-09-05MSINGLE WAVELENGTH
21x-ray298IMAGE PLATERIGAKU RAXIS IICYale mirrors2001-09-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU2001.5418
2ROTATING ANODERIGAKU RU2001.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,22.84085.60.0969.12.4630163019.1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.82.975.90.261531

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB entry 3SDH2.837.796123612334386.10.2230.2220.2220.248RANDOM47.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.021.767.34-7.36
RMS Deviations
KeyRefinement Restraint Deviation
c_dihedral_angle_d18.9
c_improper_angle_d1.41
c_angle_deg1.3
c_bond_d0.011
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2232
Nucleic Acid Atoms
Solvent Atoms25
Heterogen Atoms90

Software

Software
Software NamePurpose
CNSrefinement
SCALEPACKdata scaling
CNSphasing