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The crystal structure of phosphoglucose isomerase from rabbit muscle
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 294 polyethylene glycol 6000, Tris, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.59 52.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.067 α = 90 b = 115.174 β = 90 c = 271.5 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IIC mirrors 1996-09-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 20 91.6 0.055 0.055 17.7 3.5 47443 47443 25.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.44 68.8 0.184 0.184 4.8 1761
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR and multi-crystal averaging THROUGHOUT 2.5 15 40303 2142 100 0.18057 0.17777 0.1788 0.23366 0.2336 RANDOM 24.001
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.22 0.22 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.691 r_dihedral_angle_1_deg 3.631 r_scangle_it 2.7 r_scbond_it 1.614 r_angle_refined_deg 1.441 r_mcangle_it 0.955 r_mcbond_it 0.48 r_nbd_refined 0.24 r_xyhbond_nbd_refined 0.171 r_symmetry_vdw_refined 0.156
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.691 r_dihedral_angle_1_deg 3.631 r_scangle_it 2.7 r_scbond_it 1.614 r_angle_refined_deg 1.441 r_mcangle_it 0.955 r_mcbond_it 0.48 r_nbd_refined 0.24 r_xyhbond_nbd_refined 0.171 r_symmetry_vdw_refined 0.156 r_chiral_restr 0.103 r_symmetry_hbond_refined 0.081 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8834 Nucleic Acid Atoms Solvent Atoms 509 Heterogen Atoms
Software Software Software Name Purpose SCALEPACK data scaling MLPHARE phasing REFMAC refinement