X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.5273PEG 3350,300 mM MgCl2 50mM Mes 4mM DTT, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 273K
Crystal Properties
Matthews coefficientSolvent content
2.0840.77

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52.15α = 90
b = 82β = 100
c = 64.48γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray200CCDAPS-1mirrors2002-08-16MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.9793, 0.9794, 0.9641APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.62089.10.09812.85.9352091.41.421
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.611.6789.50.44231.961.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.619.7332754171389.110.2010.189790.186950.24247RANDOM18.013
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.010.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg11.204
r_scangle_it8.961
r_scbond_it7
r_mcangle_it4.036
r_mcbond_it2.858
r_angle_refined_deg1.301
r_symmetry_hbond_refined0.483
r_symmetry_vdw_refined0.307
r_xyhbond_nbd_refined0.229
r_nbd_refined0.224
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg11.204
r_scangle_it8.961
r_scbond_it7
r_mcangle_it4.036
r_mcbond_it2.858
r_angle_refined_deg1.301
r_symmetry_hbond_refined0.483
r_symmetry_vdw_refined0.307
r_xyhbond_nbd_refined0.229
r_nbd_refined0.224
r_chiral_restr0.106
r_bond_refined_d0.012
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2170
Nucleic Acid Atoms
Solvent Atoms353
Heterogen Atoms1

Software

Software
Software NamePurpose
HKL-2000data collection
SCALEPACKdata scaling
SOLVEphasing
RESOLVEmodel building
REFMACrefinement
HKL-2000data reduction
RESOLVEphasing