1N0O
NMR Structure of d(CCAAGGXCTTGGG), X is a 3'-phosphoglycolate, 5'-phosphate gapped lesion, 10 structures
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | PECOSY | 1.4 mM oligonucleotide | 40 mM NaH2PO4 | 6.9 | 1.0 atm | 293.15 | ||
2 | TOCSY | 1.4 mM oligonucleotide | 40 mM NaH2PO4 | 6.9 | 1.0 atm | 293.15 | ||
3 | NOESY | 1.4 mM oligonucleotide | 40 mM NaH2PO4 | 6.9 | 1.0 atm | 293.15 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | custom build | 500 | |
2 | custom build | 600 | |
3 | custom build | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
conjugate gradient minimization | XPLOR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | minimum RMSD and NMR constraints violation |
Conformers Calculated Total Number | 10 |
Conformers Submitted Total Number | 10 |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | XPLOR | 3.851 | Brunger |
2 | structure solution | XPLOR | 3.851 | Brunger |